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  5. Azfi_s0015.g013699

Azfi_s0015.g013699 (PGP2)


Aliases : PGP2

Description : subfamily ABCB transporter & original description: CDS=11-3874


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0015.g013699

Target Alias Description ECC score Gene Family Method Actions
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14091 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28385 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37349 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g38324 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006613001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g05883 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10134765g0010 PGP11 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mpzg01120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g13949 PGP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123936 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo419451 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc09g008240.3.1 PGP1, ABCB1,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1016 1164
IPR011527 ABC1_TM_dom 783 946
IPR011527 ABC1_TM_dom 181 329
IPR011527 ABC1_TM_dom 35 169
IPR003439 ABC_transporter-like_ATP-bd 407 558
No external refs found!