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  5. Azfi_s0015.g013857

Azfi_s0015.g013857


Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: CDS=8-1273


Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0015.g013857
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G09130 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 OrthoFinder output from all 47 species
AT4G17040 CLPR4 CLP protease R subunit 4 0.03 OrthoFinder output from all 47 species
Adi_g019566 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g052191 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g074670 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Aev_g07767 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Als_g00665 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Als_g01710 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aob_g22566 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Cba_g06374 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cre07.g331500 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Cre14.g619100 CLPR1, SVR2, NCLPP5 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dac_g06754 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dcu_g02591 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dcu_g17058 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dde_g21817 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ehy_g18668 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22430.1 LOC_Os03g22430 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51450.1 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.04 OrthoFinder output from all 47 species
Len_g15208 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Lfl_g01084 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Lfl_g05306 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Mp7g03170.1 CLPR4 non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species
Pir_g12837 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Pnu_g07357 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pp3c26_8310V3.1 CLPR4, Pp3c26_8310 CLP protease R subunit 4 0.01 OrthoFinder output from all 47 species
Ppi_g13921 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004018 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007703 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g17177 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Smo153292 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Spa_g12805 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Spa_g22875 CLPR4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e032571_P001 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 148 339
No external refs found!