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  5. Azfi_s0017.g014438

Azfi_s0017.g014438


Description : protein involved in PS-II assembly *(RBD1) & original description: CDS=1-462


Gene families : OG0005565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0017.g014438
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00123650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G54500 No alias Rubredoxin-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g02854 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Ala_g25460 No alias protein involved in PS-II assembly *(RBD1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g25461 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene26833.t1 Aspi01Gene26833 protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene26901.t1 Aspi01Gene26901 protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G098300.1 Ceric.13G098300 protein involved in PS-II assembly *(RBD1) & original... 0.07 OrthoFinder output from all 47 species
Cre07.g315150 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Ehy_g03089 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g11378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24370 No alias RBD1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
LOC_Os08g23410.1 LOC_Os08g23410 RBD1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
MA_158671g0010 No alias RBD1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Mp5g13990.1 No alias RBD1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Msp_g09118 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g09214 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g21356 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Pp3c1_22450V3.1 Pp3c1_22450 Rubredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g10145 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07714 No alias protein involved in PS-II assembly *(RBD1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g07715 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g097910.2.1 Solyc01g097910 RBD1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Spa_g09611 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g22961 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006086_P001 Zm00001e006086 RBD1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 64 110
No external refs found!