Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: CDS=109-615
Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0019.g015205 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s2247.g109985 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Cre01.g052100 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g08500.1 | No alias | component psRPL18 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g098890.2.1 | Solyc12g098890 | component psRPL18 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00581 | No alias | component *(uL18c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006246_P001 | Zm00001e006246 | component psRPL18 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | HCCA |
| MF | GO:0051920 | peroxiredoxin activity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005484 | Ribosomal_L18 | 86 | 204 |
| No external refs found! |
