Azfi_s0021.g015813


Description : not classified & original description: CDS=355-3027


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0021.g015813

Target Alias Description ECC score Gene Family Method Actions
Ala_g15080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007441 No alias not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Cba_g07057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G057600.1 Ceric.34G057600 not classified & original description: pacid=50623573... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g18756 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01003124001 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.06 OrthoFinder output from all 47 species
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_28758 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Len_g04342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23052 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g16158 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g44799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.04 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 324
IPR002885 Pentatricopeptide_repeat 506 529
IPR002885 Pentatricopeptide_repeat 33 50
IPR002885 Pentatricopeptide_repeat 814 834
IPR002885 Pentatricopeptide_repeat 429 476
IPR002885 Pentatricopeptide_repeat 531 578
IPR002885 Pentatricopeptide_repeat 736 783
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 633 682
No external refs found!