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  5. Ehy_g03077

Ehy_g03077


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g03077
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13400 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G082100.1 Ceric.17G082100 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029124001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
GSVIVT01037015001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03610.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03740.1 LOC_Os07g03740 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
MA_30959g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
Mp3g14110.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g14130.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Msp_g02307 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44565 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05598 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023422 No alias CAPE precursor polypeptide & original description: CDS=1-525 0.02 OrthoFinder output from all 47 species
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Solyc10g048100.3.1 Solyc10g048100 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e005581_P001 Zm00001e005581 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 129.0) 0.02 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 34 156
No external refs found!