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  5. Azfi_s0024.g020342

Azfi_s0024.g020342


Description : component *(eL30) of large ribosomal-subunit (LSU) proteome & original description: CDS=197-532


Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0024.g020342
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_02409 No alias component RPL30 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c12_9290V3.1 Pp3c12_9290 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Pp3c16_10400V3.1 Pp3c16_10400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Sam_g20179 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 13 105
No external refs found!