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  5. Azfi_s0024.g020440

Azfi_s0024.g020440 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6

Description : not classified & original description: CDS=14-616


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0024.g020440

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 OrthoFinder output from all 47 species
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.05 OrthoFinder output from all 47 species
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G052200.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G046400.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Gb_19114 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g41700.1 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Len_g49014 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_10020g0010 ATEXPA10,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_35592g0020 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g35092 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02659 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063210.3.1 ATHEXP ALPHA... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g28880 EXPB3, ATEXPB3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54039 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03133 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000038_P001 ATHEXP BETA 1.4,... Expansin-B7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 126 183
IPR009009 RlpA-like_DPBB 28 108
No external refs found!