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  5. Azfi_s0028.g023783

Azfi_s0028.g023783


Description : not classified & original description: CDS=1-2922


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0028.g023783

Target Alias Description ECC score Gene Family Method Actions
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18507 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34792.t1 Aspi01Gene34792 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026628 No alias not classified & original description: CDS=1-2499 0.04 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19539 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74755 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G023600.1 EMB2758, Ceric.01G023600 not classified & original description: pacid=50592720... 0.04 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.13G013300.1 Ceric.13G013300 not classified & original description: pacid=50635860... 0.03 OrthoFinder output from all 47 species
Ceric.19G064200.1 MEF19, Ceric.19G064200 not classified & original description: pacid=50576611... 0.04 OrthoFinder output from all 47 species
Ceric.21G010300.1 Ceric.21G010300 not classified & original description: pacid=50603707... 0.02 OrthoFinder output from all 47 species
Ceric.21G054200.1 Ceric.21G054200 not classified & original description: pacid=50602892... 0.03 OrthoFinder output from all 47 species
Ceric.39G009800.1 CRR22, Ceric.39G009800 not classified & original description: pacid=50582900... 0.04 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_12573 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os06g27790.1 REME1, LOC_Os06g27790 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Len_g19030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23170 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19423 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011031 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020627 No alias not classified & original description: CDS=1-2037 0.04 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo76226 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 145 170
IPR002885 Pentatricopeptide_repeat 43 65
IPR002885 Pentatricopeptide_repeat 860 884
IPR002885 Pentatricopeptide_repeat 349 372
IPR002885 Pentatricopeptide_repeat 682 728
IPR002885 Pentatricopeptide_repeat 273 319
IPR002885 Pentatricopeptide_repeat 374 421
IPR002885 Pentatricopeptide_repeat 782 829
IPR002885 Pentatricopeptide_repeat 171 217
IPR002885 Pentatricopeptide_repeat 579 625
IPR002885 Pentatricopeptide_repeat 476 523
IPR002885 Pentatricopeptide_repeat 68 115
No external refs found!