Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: CDS=1-2580
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G46790 | CRR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004506 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g047468 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g067305 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067822 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g068892 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g082454 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101185 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102361 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110646 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11263 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12351 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13967 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g16037 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16624 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16839 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g23774 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g23789 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27909 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36212 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g36227 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g37733 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05671 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g46291 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26977 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16755 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g16834 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23950 | EMB2758 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g35630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70076 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene01654.t1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10587.t1 | CRR2, Aspi01Gene10587 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19894.t1 | Aspi01Gene19894 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20498.t1 | CRR2, Aspi01Gene20498 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene27322.t1 | Aspi01Gene27322 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t2 | Aspi01Gene29787 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36332.t2 | Aspi01Gene36332 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene57232.t1 | Aspi01Gene57232 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene64478.t1 | EMB2758, Aspi01Gene64478 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65182.t1 | OTP86, Aspi01Gene65182 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10344 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20878 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67909 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g76573 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G047500.1 | Ceric.10G047500 | not classified & original description: pacid=50612222... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G013900.1 | Ceric.18G013900 | not classified & original description: pacid=50622476... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G020200.1 | Ceric.22G020200 | not classified & original description: pacid=50615278... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15390 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15910 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36299 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29034 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g07780.1 | OTP84, LOC_Os09g07780 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g40920.1 | LOC_Os10g40920 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33499 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06634 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07396 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25822 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g33282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g05393 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14104 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44335 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g07147 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12561 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63647 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63895 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g16163 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g29968 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002433 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005807 | No alias | not classified & original description: CDS=1-2844 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009138 | No alias | component *(NRPC16/RPC34) of TFIIIe transcription factor... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0027.g009769 | No alias | not classified & original description: CDS=1-1794 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014767 | OTP84 | not classified & original description: CDS=399-2006 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015038 | CRR22 | not classified & original description: CDS=1-1620 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017880 | No alias | not classified & original description: CDS=1-1959 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0110.g020627 | No alias | not classified & original description: CDS=1-2037 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g08403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28579 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo92610 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.04 | OrthoFinder output from all 47 species | |
| Smo99677 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g069500.1.1 | Solyc02g069500 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05656 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08462 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26741 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 473 | 520 |
| IPR002885 | Pentatricopeptide_repeat | 373 | 419 |
| IPR002885 | Pentatricopeptide_repeat | 571 | 618 |
| IPR002885 | Pentatricopeptide_repeat | 271 | 318 |
| IPR002885 | Pentatricopeptide_repeat | 705 | 751 |
| IPR002885 | Pentatricopeptide_repeat | 779 | 802 |
| IPR002885 | Pentatricopeptide_repeat | 679 | 704 |
| IPR002885 | Pentatricopeptide_repeat | 246 | 266 |
| No external refs found! |
