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  5. Azfi_s0035.g025565

Azfi_s0035.g025565


Description : not classified & original description: CDS=1-3945


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0035.g025565

Target Alias Description ECC score Gene Family Method Actions
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060301 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g065511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21644 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10587.t1 CRR2, Aspi01Gene10587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40416.t1 CRR22, Aspi01Gene40416 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54730.t1 Aspi01Gene54730 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.04 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G006100.1 Ceric.14G006100 not classified & original description: pacid=50634395... 0.04 OrthoFinder output from all 47 species
Dac_g04265 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11120 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05999 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16966 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 821 868
IPR002885 Pentatricopeptide_repeat 720 766
IPR002885 Pentatricopeptide_repeat 141 188
IPR002885 Pentatricopeptide_repeat 923 970
IPR002885 Pentatricopeptide_repeat 41 88
IPR002885 Pentatricopeptide_repeat 1025 1072
IPR002885 Pentatricopeptide_repeat 1128 1174
IPR002885 Pentatricopeptide_repeat 1102 1124
IPR002885 Pentatricopeptide_repeat 217 241
IPR002885 Pentatricopeptide_repeat 898 921
IPR002885 Pentatricopeptide_repeat 694 718
IPR002885 Pentatricopeptide_repeat 796 816
IPR002885 Pentatricopeptide_repeat 1203 1225
IPR002885 Pentatricopeptide_repeat 453 482
IPR002885 Pentatricopeptide_repeat 346 374
IPR002885 Pentatricopeptide_repeat 245 275
IPR002885 Pentatricopeptide_repeat 1000 1023
IPR002885 Pentatricopeptide_repeat 318 345
No external refs found!