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  5. Azfi_s0035.g025669

Azfi_s0035.g025669


Description : not classified & original description: CDS=1-1770


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0035.g025669
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Adi_g003790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087678 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13671 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30728 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26681 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18385.t1 OTP82, Aspi01Gene18385 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61170.t1 OTP84, Aspi01Gene61170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.02 OrthoFinder output from all 47 species
Ceric.10G030000.1 Ceric.10G030000 not classified & original description: pacid=50612250... 0.03 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.04 OrthoFinder output from all 47 species
Ceric.17G003100.1 Ceric.17G003100 not classified & original description: pacid=50617164... 0.03 OrthoFinder output from all 47 species
Ceric.18G033700.1 OTP86, Ceric.18G033700 not classified & original description: pacid=50622086... 0.03 OrthoFinder output from all 47 species
Ceric.27G070400.1 CRR22, Ceric.27G070400 not classified & original description: pacid=50605716... 0.03 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.02 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.02 OrthoFinder output from all 47 species
Ceric.36G017300.1 Ceric.36G017300 not classified & original description: pacid=50568624... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45945 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03875 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01018877001 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Gb_21443 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Len_g04760 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g03953 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18814 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53556 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008098 CRR22 not classified & original description: CDS=1-2784 0.03 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc03g115800.1.1 Solyc03g115800 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 365
IPR002885 Pentatricopeptide_repeat 109 156
IPR002885 Pentatricopeptide_repeat 216 261
IPR002885 Pentatricopeptide_repeat 420 458
IPR002885 Pentatricopeptide_repeat 82 103
IPR002885 Pentatricopeptide_repeat 191 210
IPR002885 Pentatricopeptide_repeat 292 316
No external refs found!