Description : assembly factor (eIF1A) of eIF1 & original description: CDS=1-438
Gene families : OG0002330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00147020 | evm_27.TU.AmTr_v1... | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024760 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113565 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G043500.1 | Ceric.22G043500 | assembly factor (eIF1A) of eIF1 & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g23440.1 | LOC_Os06g23440 | assembly factor (eIF1A) of eIF1 | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10688 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014127_P001 | Zm00001e014127 | assembly factor (eIF1A) of eIF1 | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
| BP | GO:0006413 | translational initiation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| CC | GO:0000775 | chromosome, centromeric region | IEP | HCCA |
| CC | GO:0000814 | ESCRT II complex | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0010970 | transport along microtubule | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0030705 | cytoskeleton-dependent intracellular transport | IEP | HCCA |
| BP | GO:0031503 | protein-containing complex localization | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0042073 | intraciliary transport | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0098687 | chromosomal region | IEP | HCCA |
| BP | GO:0099111 | microtubule-based transport | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006196 | RNA-binding_domain_S1_IF1 | 32 | 93 |
| No external refs found! |
