Azfi_s0037.g025944


Description : not classified & original description: CDS=205-1812


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0037.g025944
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G08660 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
Adi_g051324 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Adi_g056705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66522.t1 Aspi01Gene66522 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g20411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24164 RPT3, NPH3, JK218 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 328 354
IPR027356 NPH3_dom 247 303
No external refs found!