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  5. Azfi_s0038.g026224

Azfi_s0038.g026224


Description : not classified & original description: CDS=1-687


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0038.g026224

Target Alias Description ECC score Gene Family Method Actions
AT2G40830 RHC1A RING-H2 finger C1A 0.03 OrthoFinder output from all 47 species
AT5G01980 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22737.t1 Aspi01Gene22737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58651.t1 Aspi01Gene58651 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ehy_g00451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43740.1 LOC_Os07g43740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g02620.1 LOC_Os12g02620 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26016 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_413614g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc05g007895.1.1 Solyc05g007895 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g12997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 41 73
IPR001841 Znf_RING 150 191
No external refs found!