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  5. Azfi_s0042.g026918

Azfi_s0042.g026918


Description : component *(SPT20/ADA5) of SAGA transcription co-activator complex & original description: CDS=23-3655


Gene families : OG0002206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0042.g026918

Target Alias Description ECC score Gene Family Method Actions
AT1G72390 No alias CONTAINS InterPro DOMAIN/s: Spt20 family... 0.07 OrthoFinder output from all 47 species
Aev_g13851 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Als_g02622 No alias component *(SPT20/ADA5) of SAGA transcription... 0.04 OrthoFinder output from all 47 species
Aob_g34090 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Ceric.13G072900.1 Ceric.13G072900 component *(SPT20/ADA5) of SAGA transcription... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.5 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01016716001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.07 OrthoFinder output from all 47 species
LOC_Os10g25200.1 LOC_Os10g25200 component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Lfl_g13242 No alias component *(SPT20/ADA5) of SAGA transcription... 0.05 OrthoFinder output from all 47 species
MA_114383g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Ore_g37205 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016193 No alias component *(SPT20/ADA5) of SAGA transcription... 0.07 OrthoFinder output from all 47 species
Sam_g07983 No alias component *(SPT20/ADA5) of SAGA transcription... 0.04 OrthoFinder output from all 47 species
Solyc06g063010.4.1 Solyc06g063010 component SPT20/ADA5 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Zm00001e024750_P001 Zm00001e024750 component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
InterPro domains Description Start Stop
IPR046467 PHL_dom 421 574
No external refs found!