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  5. Azfi_s0042.g026927

Azfi_s0042.g026927 (TUB1)


Aliases : TUB1

Description : not classified & original description: CDS=6-941


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0042.g026927
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Als_g05405 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g10334 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10198.t1 TUB2, Aspi01Gene10198 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31254.t1 TUB2, Aspi01Gene31254 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.23G049600.1 TUB2, Ceric.23G049600 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g14303 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Len_g52480 TUB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7436374g0010 TUB6 Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 OrthoFinder output from all 47 species
Nbi_g38633 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ore_g33756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000584 TUB2 not classified & original description: CDS=76-996 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026924 TUB1 not classified & original description: CDS=124-1059 0.03 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10211 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13732 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g48008 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54936 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Zm00001e012336_P001 TUB8, Zm00001e012336 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 4 212
No external refs found!