Azfi_s0043.g027126 (EXPA16, ATHEXP ALPHA...)


Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16

Description : alpha-class expansin & original description: CDS=1-723


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0043.g027126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240270 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00072p00134750 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 OrthoFinder output from all 47 species
Aev_g14831 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17361 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g21492 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16199 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Als_g13173 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52112 EXP9, EXPA9,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene00503.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene03668.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52600.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52603.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59831.t1 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.02 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.01 OrthoFinder output from all 47 species
Ceric.32G061800.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g02211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06266 ATEXPA4, ATEXP4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13325 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22602 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g30034 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41111 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14223 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01019965001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01024572001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
Gb_01504 EXPA8, ATHEXP... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Gb_07437 No alias alpha-class expansin 0.05 OrthoFinder output from all 47 species
Gb_13985 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os01g16770.1 ATEXPA10,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os02g16730.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os02g51040.1 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06000.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os12g36040.1 EXP9, EXPA9,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Len_g37319 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47397 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.11 OrthoFinder output from all 47 species
Len_g47676 ATEXPA10,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
MA_10313796g0010 EXPB1, ATEXPB1,... Expansin-B16 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_14588g0010 ATHEXP ALPHA... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_18265g0010 ATHEXP ALPHA... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_792493g0010 ATEXPA10,... alpha-class expansin 0.06 OrthoFinder output from all 47 species
MA_86877g0010 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g09956 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30638 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36666 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31032 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011304 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=181-945 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.01 OrthoFinder output from all 47 species
Smo410512 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Solyc03g093390.4.1 ATHEXP BETA 1.4,... Expansin-B15 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Solyc06g051800.3.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc07g054170.3.1 EXPB3, ATEXPB3,... beta-class expansin 0.07 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Spa_g21671 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e000266_P002 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e000429_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e002332_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e004714_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004719_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004720_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e006194_P001 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014220_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017221_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037881_P001 ATHEXP BETA 1.4,... Expansin-B2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037884_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Zm00001e037914_P002 ATHEXP BETA 1.4,... Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) 0.02 OrthoFinder output from all 47 species
Zm00001e038931_P002 ATEXPL2, EXPL2,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
Zm00001e041376_P001 ATEXP13,... alpha-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 47 134
IPR007117 Expansin_CBD 145 222
No external refs found!