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  5. Azfi_s0048.g030677

Azfi_s0048.g030677


Description : component *(uL29c) of large plastid ribosomal-subunit proteome & original description: CDS=186-707


Gene families : OG0004758 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0048.g030677
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00170150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT5G65220 No alias Ribosomal L29 family protein 0.16 OrthoFinder output from all 47 species
Aev_g03513 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g00554 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g34521 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g00731 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g32624 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cba_g00374 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.34G037300.1 Ceric.34G037300 component *(uL29c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cre06.g259850 No alias No description available 0.09 OrthoFinder output from all 47 species
Dac_g03965 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g13501 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g20187 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
LOC_Os02g51790.1 LOC_Os02g51790 component psRPL29 of large ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Len_g45621 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g16498 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10268152g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
MA_10431457g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
MA_42151g0010 No alias component psRPL29 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp4g10390.1 No alias component psRPL29 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Msp_g08238 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Nbi_g13470 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ore_g04033 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Pnu_g20263 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c15_20650V3.1 Pp3c15_20650 Ribosomal L29 family protein 0.04 OrthoFinder output from all 47 species
Pp3c9_19800V3.1 Pp3c9_19800 Ribosomal L29 family protein 0.07 OrthoFinder output from all 47 species
Ppi_g10973 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008714 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Sam_g12929 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g12930 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc06g072470.4.1 Solyc06g072470 component psRPL29 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Spa_g03535 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Spa_g13994 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Tin_g03662 No alias component *(uL29c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e023859_P001 Zm00001e023859 component psRPL29 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 78 133
No external refs found!