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  5. Azfi_s0049.g030702

Azfi_s0049.g030702 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: CDS=40-3219


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0049.g030702

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g39266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18237 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26356 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26671.t1 LOP1, TRN1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68470.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06916 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11503 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15505 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25604 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28705 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g51318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_94605g0010 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g34586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21358 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45781 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 348 558
No external refs found!