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  5. Azfi_s0049.g030927

Azfi_s0049.g030927


Description : not classified & original description: CDS=165-731


Gene families : OG0001512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0049.g030927

Target Alias Description ECC score Gene Family Method Actions
AT2G28370 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Aop_g01554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025688001 No alias CASP-like protein 5A1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g04778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 45 173
No external refs found!