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  5. Azfi_s0059.g034517

Azfi_s0059.g034517


Description : LSU processome maturation factor *(NSA2) & original description: CDS=1-834


Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0059.g034517

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00185140 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
AT5G06360 No alias Ribosomal protein S8e family protein 0.03 OrthoFinder output from all 47 species
Aob_g02718 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G100700.1 Ceric.07G100700 LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g507300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dac_g42224 No alias LSU processome maturation factor *(NSA2) & original... 0.1 OrthoFinder output from all 47 species
Dde_g09563 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06447 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Len_g01146 No alias LSU processome maturation factor *(NSA2) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g20840 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Mp4g23600.1 No alias NSA2 LSU processome maturation factor 0.12 OrthoFinder output from all 47 species
Msp_g01445 No alias LSU processome maturation factor *(NSA2) & original... 0.07 OrthoFinder output from all 47 species
Ppi_g32827 No alias LSU processome maturation factor *(NSA2) & original... 0.05 OrthoFinder output from all 47 species
Smo402189 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Spa_g00911 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Tin_g05409 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010952_P001 Zm00001e010952 NSA2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
Zm00001e035832_P001 Zm00001e035832 NSA2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 54 276
No external refs found!