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  5. Azfi_s0059.g034591

Azfi_s0059.g034591


Description : not classified & original description: CDS=1-1749


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0059.g034591
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Ala_g07176 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0410.g068507 No alias not classified & original description: CDS=1-2022 0.06 OrthoFinder output from all 47 species
Ceric.13G001600.1 Ceric.13G001600 not classified & original description: pacid=50636694... 0.03 OrthoFinder output from all 47 species
Ceric.28G056200.1 Ceric.28G056200 not classified & original description: pacid=50570685... 0.04 OrthoFinder output from all 47 species
Dde_g21802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010869001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
LOC_Os07g39910.1 LOC_Os07g39910 Pentatricopeptide repeat-containing protein At1g25360... 0.05 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
MA_131437g0010 No alias RNA editing factor (MEF3) 0.04 OrthoFinder output from all 47 species
MA_140208g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Msp_g02080 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19449 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g24850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g08832 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31968 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.06 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 74 97
IPR002885 Pentatricopeptide_repeat 381 403
IPR002885 Pentatricopeptide_repeat 483 503
IPR002885 Pentatricopeptide_repeat 176 198
IPR002885 Pentatricopeptide_repeat 406 455
IPR002885 Pentatricopeptide_repeat 201 248
IPR002885 Pentatricopeptide_repeat 304 351
IPR002885 Pentatricopeptide_repeat 99 147
No external refs found!