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  5. Azfi_s0065.g035757

Azfi_s0065.g035757


Description : component *(uL1c) of large plastid ribosomal-subunit proteome & original description: CDS=125-1189


Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0065.g035757

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00035950 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
AT3G63490 No alias Ribosomal protein L1p/L10e family 0.08 OrthoFinder output from all 47 species
Adi_g083284 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aev_g11306 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g13358 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aob_g31675 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aop_g11179 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.36G042400.1 Ceric.36G042400 component *(uL1c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.72 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea 0.01 OrthoFinder output from all 47 species
Cre02.g088900 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Dac_g00779 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g06155 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g12366 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01020727001 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
GSVIVT01032196001 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Gb_16169 No alias component psRPL1 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os05g32220.1 LOC_Os05g32220 component psRPL1 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g24587 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g03897 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g19309 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10002614g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp1g07500.1 No alias component psRPL1 of large ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Nbi_g11958 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ore_g28354 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g01275 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c23_11170V3.1 Pp3c23_11170 Ribosomal protein L1p/L10e family 0.03 OrthoFinder output from all 47 species
Ppi_g41124 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023589 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g18339 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo143134 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Spa_g16769 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g00638 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e031570_P001 Zm00001e031570 component psRPL1 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 191 381
No external refs found!