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  5. Azfi_s0065.g035841

Azfi_s0065.g035841 (TUB1)


Aliases : TUB1

Description : not classified & original description: CDS=1-585


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0065.g035841
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00192970 evm_27.TU.AmTr_v1... Tubulin beta-2 chain OS=Triticum aestivum 0.04 OrthoFinder output from all 47 species
AT5G23860 TUB8 tubulin beta 8 0.02 OrthoFinder output from all 47 species
Adi_g075879 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22864.t1 TUB2, Aspi01Gene22864 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35881.t1 TUB6, Aspi01Gene35881 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56038.t1 TUB7, Aspi01Gene56038 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene61960.t2 TUB7, Aspi01Gene61960 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s2511.g111995 TUB5 not classified & original description: CDS=1-672 0.08 OrthoFinder output from all 47 species
Ceric.07G057000.1 TUB6, Ceric.07G057000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cre12.g542250 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Cre12.g549550 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g31278 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g31279 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Gb_30905 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Gb_33450 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Len_g23145 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g43850 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
MA_4935021g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 189.0) 0.02 OrthoFinder output from all 47 species
MA_9451675g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Msp_g09508 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g29673 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ppi_g05536 TUB8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo231661 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 98 177
No external refs found!