Azfi_s0066.g036077

Description : component *(bS16m) of small mitoribosomal-subunit proteome & original description: CDS=160-771

Gene families : OG0002911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002911_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0066.g036077
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AT4G34620	SSR16	small subunit ribosomal protein 16	0.06	OrthoFinder output from all 47 species
Adi_g002716	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Adi_g074405	SSR16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g16922	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g22156	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Cba_g20937	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cre12.g494450	No alias	30S ribosomal protein S16, chloroplastic OS=Staurastrum...	0.07	OrthoFinder output from all 47 species
Len_g04546	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Mp4g12130.1	SSR16	component mtRPS16 of small ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Nbi_g00253	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Pir_g10568	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pnu_g28852	SSR16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04188	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008294	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g10314	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g10315	No alias	component *(bS16m) of small mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0004668	protein-arginine deiminase activity	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009445	putrescine metabolic process	IEP	HCCA
BP	GO:0009446	putrescine biosynthetic process	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000307	Ribosomal_S16	88	149

External Links

No external refs found!

Azfi_s0066.g036077

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation