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  5. Azfi_s0068.g036428

Azfi_s0068.g036428 (MSL5)


Aliases : MSL5

Description : mechanosensitive ion channel *(MSL) & original description: CDS=8-2581


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0068.g036428

Target Alias Description ECC score Gene Family Method Actions
AT5G12080 MSL10, ATMSL10 mechanosensitive channel of small conductance-like 10 0.05 OrthoFinder output from all 47 species
Ehy_g32324 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15210 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Smo81632 MSL5 Solute transport.channels.MSL mechanosensitive ion channel 0.05 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Tin_g11582 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 626 825
No external refs found!