Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: CDS=185-373
Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0068.g036442 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00064720 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g127141 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g34461 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g65418 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g73257 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G056700.1 | Ceric.05G056700 | component *(eS30) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.20G020400.1 | Ceric.20G020400 | component *(eS30) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001003.33 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.21 | OrthoFinder output from all 47 species | |
| Cre16.g666301 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.31 | OrthoFinder output from all 47 species | |
| Dcu_g18710 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g30830 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016902001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_16784 | No alias | component RPS30 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23464 | No alias | component RPS30 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| LOC_Os02g56014.1 | LOC_Os02g56014 | component RPS30 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Len_g35390 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| MA_10432727g0010 | No alias | component RPS30 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| Mp2g24290.1 | No alias | component RPS30 of SSU proteome | 0.24 | OrthoFinder output from all 47 species | |
| Mp8g09080.1 | No alias | component RPS30 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Nbi_g43255 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_420V3.1 | Pp3c1_420 | Ribosomal protein S30 family protein | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c2_28870V3.1 | Pp3c2_28870 | Ribosomal protein S30 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c2_29010V3.1 | Pp3c2_29010 | Ribosomal protein S30 family protein | 0.13 | OrthoFinder output from all 47 species | |
| Ppi_g24413 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008991 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0211.g025924 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05835 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g17534 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g31576 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g35687 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g45897 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g52915 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Smo227173 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc08g076340.3.1 | Solyc08g076340 | component RPS30 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g45532 | No alias | component *(eS30) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
