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  5. Azfi_s0073.g037173

Azfi_s0073.g037173


Description : not classified & original description: CDS=1-2688


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0073.g037173
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Adi_g005699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000981 No alias not classified & original description: CDS=1-2859 0.1 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.1 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.03 OrthoFinder output from all 47 species
Azfi_s0758.g085492 No alias not classified & original description: CDS=1-2652 0.1 OrthoFinder output from all 47 species
Azfi_s0768.g086029 No alias not classified & original description: CDS=1-2331 0.09 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.05 OrthoFinder output from all 47 species
Azfi_s2054.g108918 CRR22 not classified & original description: CDS=1-2412 0.13 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Msp_g36039 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10914 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 236 281
IPR002885 Pentatricopeptide_repeat 540 587
IPR002885 Pentatricopeptide_repeat 439 486
IPR002885 Pentatricopeptide_repeat 741 788
IPR002885 Pentatricopeptide_repeat 339 383
IPR002885 Pentatricopeptide_repeat 644 688
IPR002885 Pentatricopeptide_repeat 514 538
IPR002885 Pentatricopeptide_repeat 138 165
No external refs found!