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  5. Azfi_s0084.g039063

Azfi_s0084.g039063 (DER2.2)


Aliases : DER2.2

Description : component *(DFM1) of ER-associated protein degradation (ERAD) machinery & original description: CDS=35-772


Gene families : OG0003011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0084.g039063

Target Alias Description ECC score Gene Family Method Actions
Nbi_g12685 DER2.2 component *(DFM1) of ER-associated protein degradation... 0.04 OrthoFinder output from all 47 species
Spa_g29674 DER2.2 component *(DFM1) of ER-associated protein degradation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007599 DER1 12 211
No external refs found!