Description : not classified & original description: CDS=1-2490
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g003333 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g035608 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g46730 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26153 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19294 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32345 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g02865 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g36436 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68065 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene01267.t1 | CRR2, Aspi01Gene01267 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43974.t1 | REME1, Aspi01Gene43974 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g20881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67033 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G035600.1 | Ceric.35G035600 | not classified & original description: pacid=50580802... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02877 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45907 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g10527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003766001 | LPA66 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_00195 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11220 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11688 | CRR2 | OTP70 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13222 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14172 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14867 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14966 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_17076 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18745 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_20634 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_27322 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31374 | EMB2261 | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33051 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33210 | OTP84 | RNA editing factor (OTP82) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_35190 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38679 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38680 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_39402 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g30620.1 | LOC_Os12g30620 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04722 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g22099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11358 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g26082 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g33650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16442 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10363 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g40819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13846 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g33120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g40056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53972 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g61267 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03326 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g10477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12231 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g26414 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g30280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g005170.3.1 | Solyc07g005170 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07054 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09284 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12113 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g17876 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26788 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g53135 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g26639 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26899 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 716 | 741 |
| IPR002885 | Pentatricopeptide_repeat | 310 | 333 |
| IPR002885 | Pentatricopeptide_repeat | 616 | 641 |
| IPR002885 | Pentatricopeptide_repeat | 207 | 229 |
| IPR002885 | Pentatricopeptide_repeat | 541 | 587 |
| IPR002885 | Pentatricopeptide_repeat | 642 | 690 |
| IPR002885 | Pentatricopeptide_repeat | 233 | 279 |
| IPR002885 | Pentatricopeptide_repeat | 438 | 485 |
| IPR002885 | Pentatricopeptide_repeat | 129 | 176 |
| IPR002885 | Pentatricopeptide_repeat | 336 | 382 |
| No external refs found! |
