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  5. Azfi_s0109.g045371

Azfi_s0109.g045371 (emb2726)


Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: CDS=1-870


Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0109.g045371
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT4G29060 emb2726 elongation factor Ts family protein 0.04 OrthoFinder output from all 47 species
Aev_g28882 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aop_g25286 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Cba_g71569 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Ceric.03G081000.1 emb2726, Ceric.03G081000 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g519180 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g16809 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05564 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Gb_29672 emb2726 EF-Ts translation elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g35630.1 emb2726, LOC_Os12g35630 EF-Ts translation elongation factor 0.02 OrthoFinder output from all 47 species
Len_g59815 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Mp2g23510.1 emb2726 EF-Ts translation elongation factor 0.02 OrthoFinder output from all 47 species
Msp_g12193 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14225 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08953 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g29843 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Smo60716 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Spa_g11112 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Tin_g03798 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010912_P001 emb2726, Zm00001e010912 EF-Ts translation elongation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014039 Transl_elong_EFTs/EF1B_dimer 143 174
IPR014039 Transl_elong_EFTs/EF1B_dimer 165 269
No external refs found!