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  5. Azfi_s0114.g046079

Azfi_s0114.g046079


Description : not classified & original description: CDS=202-2550


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0114.g046079

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g004268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18401 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30899 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene65088.t1 Aspi01Gene65088 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t2 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009227 No alias not classified & original description: CDS=1-1950 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011300 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Azfi_s0743.g084788 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Azfi_s2068.g108965 No alias not classified & original description: CDS=97-387 0.02 OrthoFinder output from all 47 species
Cba_g27583 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g73650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G054200.1 Ceric.21G054200 not classified & original description: pacid=50602892... 0.03 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.03 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12504 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36360 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g20662 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_305950g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.02 OrthoFinder output from all 47 species
Msp_g23166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015411 No alias not classified & original description: CDS=1-3726 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017584 No alias not classified & original description: CDS=1-3165 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo81279 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Solyc04g064750.2.1 Solyc04g064750 RNA editing factor (MEF12). serine carboxypeptidase 0.03 OrthoFinder output from all 47 species
Spa_g46731 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06583 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 157 185
IPR002885 Pentatricopeptide_repeat 442 462
IPR002885 Pentatricopeptide_repeat 575 599
IPR002885 Pentatricopeptide_repeat 497 551
IPR002885 Pentatricopeptide_repeat 367 414
IPR002885 Pentatricopeptide_repeat 279 325
IPR032867 DYW_dom 684 775
No external refs found!