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  5. Azfi_s0115.g046284

Azfi_s0115.g046284


Description : not classified & original description: CDS=76-2679


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0115.g046284
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g034273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36522 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40546 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68927 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25992.t1 Aspi01Gene25992 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34544.t1 Aspi01Gene34544 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.02 OrthoFinder output from all 47 species
Cba_g07190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G043400.1 Ceric.03G043400 not classified & original description: pacid=50571475... 0.03 OrthoFinder output from all 47 species
Ceric.06G074600.1 Ceric.06G074600 not classified & original description: pacid=50619733... 0.02 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.22G077500.1 Ceric.22G077500 not classified & original description: pacid=50615168... 0.04 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26299 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35084 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_82569g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g04529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28789 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30522 OTP81 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15871 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22807 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Tin_g06077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 297 323
IPR002885 Pentatricopeptide_repeat 493 520
IPR002885 Pentatricopeptide_repeat 666 689
IPR002885 Pentatricopeptide_repeat 465 491
IPR002885 Pentatricopeptide_repeat 564 585
IPR002885 Pentatricopeptide_repeat 692 739
IPR002885 Pentatricopeptide_repeat 390 436
IPR002885 Pentatricopeptide_repeat 591 635
IPR002885 Pentatricopeptide_repeat 221 270
IPR002885 Pentatricopeptide_repeat 122 164
No external refs found!