Azfi_s0120.g046799


Description : not classified & original description: CDS=1-2385


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0120.g046799

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g06481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10890 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g30808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G019900.1 Ceric.02G019900 not classified & original description: pacid=50585305... 0.06 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.06 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.11 OrthoFinder output from all 47 species
Ceric.28G027300.1 CRR22, Ceric.28G027300 not classified & original description: pacid=50569783... 0.12 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g49996 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
MA_121512g0010 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Msp_g03575 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06227 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15560 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15565 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18381 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38654 DOT4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g39319 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g28962 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07449 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g15720 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31855 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007526 No alias not classified & original description: CDS=1-1728 0.06 OrthoFinder output from all 47 species
Spa_g54647 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 418 465
IPR002885 Pentatricopeptide_repeat 621 668
IPR002885 Pentatricopeptide_repeat 215 263
IPR002885 Pentatricopeptide_repeat 519 565
IPR002885 Pentatricopeptide_repeat 121 151
IPR002885 Pentatricopeptide_repeat 319 348
IPR002885 Pentatricopeptide_repeat 93 120
IPR002885 Pentatricopeptide_repeat 594 615
No external refs found!