Aliases : MBD05, MBD5, ATMBD5
Description : methylation reader *(MBD5-6) & original description: CDS=313-1701
Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g058770 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075123 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26984 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27312 | ATMBD6, MBD6 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04569 | No alias | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37242 | No alias | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04676 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| BP | GO:0007015 | actin filament organization | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| CC | GO:0015629 | actin cytoskeleton | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0045010 | actin nucleation | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001739 | Methyl_CpG_DNA-bd | 237 | 290 |
| No external refs found! |
