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  5. Azfi_s0158.g053875

Azfi_s0158.g053875 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: CDS=259-3537


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0158.g053875
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Als_g07418 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07123 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37130 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44531.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62285.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043457 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: CDS=464-2743 0.01 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.05 OrthoFinder output from all 47 species
Ceric.38G020300.1 Ceric.38G020300 methylation reader *(MBD5-6) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10163 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20923 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024953001 No alias No description available 0.04 OrthoFinder output from all 47 species
Msp_g13225 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03734 No alias methylation reader *(MBD5-6) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g09180 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01254 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18250 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55639 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04676 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 375 431
No external refs found!