Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-882
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0159.g053943 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00264430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g008787 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26221 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07901 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G044800.1 | RMA3, ATRMA3,... | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G012000.1 | Ceric.19G012000 | not classified & original description: pacid=50576245... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.30G056300.1 | Ceric.30G056300 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g09740 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41466 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0103.g020008 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-681 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g054080.3.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10344 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27246 | No alias | E3 ubiquiTin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007434_P001 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027370 | Znf-RING_euk | 43 | 72 |
| No external refs found! |
