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  5. Azfi_s0162.g054145

Azfi_s0162.g054145


Description : not classified & original description: CDS=1-1809


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0162.g054145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.03 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.03 OrthoFinder output from all 47 species
Dac_g05708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10430689g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004710_P005 Zm00001e004710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 238 297
IPR000504 RRM_dom 333 403
IPR029123 RBM39_linker 424 526
No external refs found!