Description : not classified & original description: CDS=106-348
Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0171.g055692 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00271660 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G04840 | No alias | Ribosomal protein S3Ae | 0.06 | OrthoFinder output from all 47 species | |
| AT4G34670 | No alias | Ribosomal protein S3Ae | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05100 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g59790 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G049700.1 | Ceric.10G049700 | component *(eS1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G043000.1 | Ceric.32G043000 | component *(eS1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.39 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre13.g568650 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g13329 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g26683 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09698 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021836001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_02289 | No alias | component RPS3a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g18550.1 | LOC_Os02g18550 | component RPS3a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g10340.1 | LOC_Os03g10340 | component RPS3a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g21798.1 | LOC_Os12g21798 | component RPS3a of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| MA_124901g0010 | No alias | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_31004g0010 | No alias | component RPS3a of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Mp6g02810.1 | No alias | component RPS3a of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g05152 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c11_17260V3.1 | Pp3c11_17260 | Ribosomal protein S3Ae | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0206.g025749 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06811 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g07668 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g14495 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Smo160008 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo271907 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g097900.3.1 | Solyc03g097900 | component RPS3a of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g072490.3.1 | Solyc06g072490 | component RPS3a of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g082520.3.1 | Solyc09g082520 | component RPS3a of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g05776 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01747 | No alias | component *(eS1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038777_P001 | Zm00001e038777 | component RPS3a of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
