Aliases : OTP86
Description : not classified & original description: CDS=1-2742
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00145640 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00210570 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G48910 | LPA66 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065086 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g066461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075673 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g095207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g103876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14340 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36451 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36487 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g39266 | MEF19 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05094 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05762 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07424 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07465 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18062 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19266 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20750 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g54765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54960 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g60944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08782 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18136 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23786 | MEF19 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g57040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70480 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70862 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t2 | OSB3, Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene40497.t1 | CRR2, Aspi01Gene40497 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54509.t1 | Aspi01Gene54509 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000621 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=97-654 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000793 | No alias | not classified & original description: CDS=1-2415 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036581 | No alias | not classified & original description: CDS=1-1653 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0270.g061187 | No alias | not classified & original description: CDS=1-3441 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G039400.1 | Ceric.03G039400 | not classified & original description: pacid=50571919... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G033700.1 | OTP86, Ceric.18G033700 | not classified & original description: pacid=50622086... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G054200.1 | Ceric.21G054200 | not classified & original description: pacid=50602892... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G077500.1 | Ceric.22G077500 | not classified & original description: pacid=50615168... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G060200.1 | Ceric.29G060200 | not classified & original description: pacid=50624987... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G000500.1 | Ceric.34G000500 | not classified & original description: pacid=50623432... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G063100.1 | Ceric.34G063100 | not classified & original description: pacid=50623551... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22189 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g46003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05694 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08819 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09653 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16664 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g22538 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38682 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50046 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g05762 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22351 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22846 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04950 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13146 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21750 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017989001 | LOI1, MEF11 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018877001 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030443001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032721001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27291 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g47920.1 | LOC_Os06g47920 | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g13990.1 | LOC_Os08g13990 | Pentatricopeptide repeat-containing protein At2g37320... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03913 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g04760 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18960 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04822 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06187 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06599 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07688 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12699 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39398 | CRR21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18814 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23872 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27459 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39331 | OTP85 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41642 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11796 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g42997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57963 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63850 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06968 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g17170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g30840 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31582 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g33646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g40980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53959 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15980 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g19039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115800.1.1 | Solyc03g115800 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g065840.3.1 | OSB1, Solyc09g065840 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14568 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06622 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12143 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17143 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g17888 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26726 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29179 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 268 | 290 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 396 |
| IPR002885 | Pentatricopeptide_repeat | 296 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 397 | 443 |
| IPR002885 | Pentatricopeptide_repeat | 191 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 498 | 546 |
| IPR002885 | Pentatricopeptide_repeat | 87 | 136 |
| IPR002885 | Pentatricopeptide_repeat | 600 | 647 |
| No external refs found! |
