Azfi_s0183.g056513 (ATVLN2, VLN2)


Aliases : ATVLN2, VLN2

Description : villin actin-crosslinking factor & original description: CDS=495-3170


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0183.g056513
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Als_g20997 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G019500.1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 856 891
IPR007123 Gelsolin-like_dom 149 217
IPR007123 Gelsolin-like_dom 408 484
IPR007123 Gelsolin-like_dom 532 601
IPR007123 Gelsolin-like_dom 271 338
IPR007123 Gelsolin-like_dom 29 111
No external refs found!