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  5. Ehy_g04385

Ehy_g04385


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04385

Target Alias Description ECC score Gene Family Method Actions
AT1G67950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
AT5G46870 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g108360 BPA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g17698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7907g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013208 No alias not classified & original description: CDS=23-751 0.02 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g04495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g57115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e012169_P002 Zm00001e012169 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024575_P001 Zm00001e024575 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 72
No external refs found!