Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: CDS=1-2115
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00240430 | OSB3,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00081p00019740 | CRR22,... | Pentatricopeptide repeat-containing protein At5g27110... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00045930 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G31430 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G53600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G49740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G32430 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33990 | EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G50990 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G52850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g033331 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036254 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g36953 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42493 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g46724 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03141 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g03840 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04425 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05107 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05916 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07455 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14743 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18506 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18796 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g20449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22752 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26442 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55091 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27256 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g27610 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g41219 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g41404 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g18332 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene61045.t1 | VAC1, ECB2,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009069 | CRR22 | not classified & original description: CDS=1-1992 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035815 | No alias | not classified & original description: CDS=1-2163 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0544.g076391 | No alias | not classified & original description: CDS=1-906 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g05246 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05882 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07772 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07785 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29457 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g29878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35072 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g66427 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g76220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G043000.1 | Ceric.03G043000 | not classified & original description: pacid=50572819... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G015100.1 | Ceric.04G015100 | not classified & original description: pacid=50632156... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G097800.1 | Ceric.04G097800 | not classified & original description: pacid=50631082... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G062300.1 | Ceric.09G062300 | not classified & original description: pacid=50587557... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G010900.1 | Ceric.13G010900 | not classified & original description: pacid=50636623... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G082600.1 | Ceric.13G082600 | not classified & original description: pacid=50636923... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G016300.1 | Ceric.16G016300 | not classified & original description: pacid=50589149... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G079900.1 | CRR22, Ceric.20G079900 | not classified & original description: pacid=50567064... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G080700.1 | Ceric.21G080700 | not classified & original description: pacid=50603857... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G079200.1 | OTP84, Ceric.22G079200 | not classified & original description: pacid=50615391... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G044700.1 | Ceric.28G044700 | not classified & original description: pacid=50570014... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G037100.1 | Ceric.30G037100 | not classified & original description: pacid=50608918... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g16383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39652 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g39653 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07748 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g16545 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g16950 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g33764 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g40678 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g45852 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g13626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18756 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21829 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g34870.1 | LOC_Os09g34870 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g01850.1 | LOC_Os12g01850 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g08140.1 | LOC_Os12g08140 | Pentatricopeptide repeat-containing protein At2g33760... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17578 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_482767g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
| MA_60579g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| MA_7379g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| MA_95261g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02848 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03328 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34529 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g04512 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30093 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g16080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31871 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53545 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59338 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g63671 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003527 | EMB2758 | not classified & original description: CDS=1-1284 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006214 | No alias | not classified & original description: CDS=115-2940 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013079 | No alias | not classified & original description: CDS=41-367 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28859 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15290 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g23279 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30241 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 344 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 316 | 338 |
| IPR002885 | Pentatricopeptide_repeat | 621 | 641 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 541 |
| IPR002885 | Pentatricopeptide_repeat | 417 | 442 |
| IPR002885 | Pentatricopeptide_repeat | 240 | 287 |
| IPR002885 | Pentatricopeptide_repeat | 443 | 489 |
| IPR002885 | Pentatricopeptide_repeat | 140 | 187 |
| IPR002885 | Pentatricopeptide_repeat | 545 | 592 |
| No external refs found! |
