1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g04486

Ehy_g04486


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04486
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G04030 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22341 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g11673 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g12325 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59764.t2 Aspi01Gene59764 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g15907 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g16839 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g24534 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.22G040100.1 Ceric.22G040100 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.28G068700.1 Ceric.28G068700 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08815 KAN2 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21452 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15807 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g40548 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_181986g0010 ATMYR1, MYR1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_66960g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g31008 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g37137 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Nbi_g00872 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g19411 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g03399 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g58021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g24824 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g39146 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g57297 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g30879 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g40903 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 125 171
IPR001005 SANT/Myb 31 81
No external refs found!