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  5. Azfi_s0251.g060280

Azfi_s0251.g060280


Description : not classified & original description: CDS=1-3180


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0251.g060280
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00587p00011650 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70862 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39631.t1 CRR2, Aspi01Gene39631 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65137.t1 Aspi01Gene65137 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011650 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2676 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037173 No alias not classified & original description: CDS=1-2688 0.1 OrthoFinder output from all 47 species
Azfi_s0370.g067092 No alias not classified & original description: CDS=34-3717 0.07 OrthoFinder output from all 47 species
Cba_g78232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.06 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02840 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10914 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g12220 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54414 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000561 No alias not classified & original description: CDS=191-3046 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017029 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Spa_g27589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 283 305
IPR002885 Pentatricopeptide_repeat 895 918
IPR002885 Pentatricopeptide_repeat 922 967
IPR002885 Pentatricopeptide_repeat 513 559
IPR002885 Pentatricopeptide_repeat 819 865
IPR002885 Pentatricopeptide_repeat 309 355
IPR002885 Pentatricopeptide_repeat 717 763
IPR002885 Pentatricopeptide_repeat 103 150
IPR002885 Pentatricopeptide_repeat 207 253
No external refs found!