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  5. Azfi_s0251.g060297

Azfi_s0251.g060297


Description : not classified & original description: CDS=1-1806


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0251.g060297

Target Alias Description ECC score Gene Family Method Actions
Ala_g07993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04456 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23988 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56635.t1 Aspi01Gene56635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060572 No alias not classified & original description: CDS=1-2448 0.06 OrthoFinder output from all 47 species
Cba_g04693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.04 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.05 OrthoFinder output from all 47 species
Dac_g08179 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g45747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g15615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13362 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47300 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009203 No alias not classified & original description: CDS=323-3121 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013695 No alias not classified & original description: CDS=1-2949 0.04 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 496 527
IPR002885 Pentatricopeptide_repeat 226 274
IPR002885 Pentatricopeptide_repeat 125 172
IPR002885 Pentatricopeptide_repeat 59 89
IPR002885 Pentatricopeptide_repeat 331 360
IPR002885 Pentatricopeptide_repeat 303 328
IPR002885 Pentatricopeptide_repeat 403 426
IPR002885 Pentatricopeptide_repeat 429 475
No external refs found!