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  5. Azfi_s0261.g060766

Azfi_s0261.g060766


Description : not classified & original description: CDS=317-2245


Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0261.g060766
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT4G33400 No alias Vacuolar import/degradation, Vid27-related protein 0.08 OrthoFinder output from all 47 species
Ala_g23497 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g12821 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00721 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.22G002700.1 Ceric.22G002700 not classified & original description: pacid=50615126... 0.06 OrthoFinder output from all 47 species
Dcu_g09878 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g26708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009497001 No alias Protein CYPRO4 OS=Cynara cardunculus 0.1 OrthoFinder output from all 47 species
LOC_Os02g08190.1 LOC_Os02g08190 Protein CYPRO4 OS=Cynara cardunculus... 0.08 OrthoFinder output from all 47 species
Len_g12390 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_12899g0010 No alias Protein CYPRO4 OS=Cynara cardunculus... 0.04 OrthoFinder output from all 47 species
Msp_g32123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019918 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Sam_g19394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g078940.3.1 Solyc04g078940 Protein CYPRO4 OS=Cynara cardunculus... 0.05 OrthoFinder output from all 47 species
Spa_g13061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013808_P001 Zm00001e013808 Protein CYPRO4 OS=Cynara cardunculus... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013863 VID27_C 274 579
No external refs found!