Azfi_s0272.g061268


Description : RsmE-type rRNA methyltransferase & original description: CDS=153-1109


Gene families : OG0007133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007133_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0272.g061268

Target Alias Description ECC score Gene Family Method Actions
Cre03.g175800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g15460 No alias RsmE-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27668 No alias RsmE-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR046886 RsmE_MTase_dom 150 304
IPR046887 RsmE_PUA-like 89 134
No external refs found!