Description : component *(eS28) of small ribosomal-subunit (SSU) proteome & original description: CDS=11-253
Gene families : OG0006085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0280.g062329 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G10090 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G64140 | RPS28 | ribosomal protein S28 | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene38530.t1 | Aspi01Gene38530 | component *(eS28) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G107900.1 | Ceric.01G107900 | component *(eS28) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.27 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g510450 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.31 | OrthoFinder output from all 47 species | |
| Dcu_g44812 | RPS28 | component *(eS28) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033420001 | RPS28 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os10g27174.1 | LOC_Os10g27174 | component RPS28 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| MA_10206328g0010 | RPS28 | component RPS28 of SSU proteome | 0.11 | OrthoFinder output from all 47 species | |
| MA_550900g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g15160.1 | No alias | component RPS28 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Pir_g05763 | No alias | component *(eS28) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c14_19610V3.1 | Pp3c14_19610 | Nucleic acid-binding, OB-fold-like protein | 0.12 | OrthoFinder output from all 47 species | |
| Pp3c1_28770V3.1 | Pp3c1_28770 | Nucleic acid-binding, OB-fold-like protein | 0.12 | OrthoFinder output from all 47 species | |
| Pp3c5_6000V3.1 | Pp3c5_6000 | Nucleic acid-binding, OB-fold-like protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c6_27040V3.1 | Pp3c6_27040 | Nucleic acid-binding, OB-fold-like protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07644 | RPS28 | component *(eS28) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Smo170205 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g021400.2.1 | RPS28, Solyc02g021400 | component RPS28 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g078630.2.1 | RPS28, Solyc10g078630 | component RPS28 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000507_P001 | Zm00001e000507 | component RPS28 of SSU proteome | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
